Multi electrode analysis


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Documentation for package ‘sjemea’ version 0.32

Help Pages

compute.ns Compute network spikes
count.nab Histogram routines to help compute the cross-correlation between a pair of spike trains.
feller.read.spikes Read in a directory of spike times from Marla Feller and create a "spikes" data structure.
hist.ab Histogram routines to help compute the cross-correlation between a pair of spike trains.
histbi.ab Histogram routines to help compute the cross-correlation between a pair of spike trains.
iit.read.spikes Read in the .mat file containing MEA data from Alan Litke
jay.read.spikes Read in the .txt file from Neuroexplorer and create a "spikes" data structure.
litke.read.spikes Read in the .mat file containing MEA data from Alan Litke
read.spikes Read in the .txt file from Neuroexplorer and create a "spikes" data structure.
sanger.read.spikes Read in a nexTimestamps file from Neuroexplorer and create a "spikes" data structure.
show.ns Compute network spikes
spikes.to.bursts Burst detection of MEA spike trains.
spikes.to.bursts.surprise Burst detection of MEA spike trains.
test.count.hist.nab Histogram routines to help compute the cross-correlation between a pair of spike trains.
test.count.hist2.nab Histogram routines to help compute the cross-correlation between a pair of spike trains.
test.hist.ab Histogram routines to help compute the cross-correlation between a pair of spike trains.
test.histograms.versus.r Histogram routines to help compute the cross-correlation between a pair of spike trains.