Stephen J Eglen

Book

• E Sernagor, SJ Eglen, WA Harris, R Wong (eds) (2006). Retinal development. Cambridge University Press. September 2006. Further details Amazon (US) (UK). Reviews: Development British Society for Developmental Biology Visual Neuroscience

Journal publications

• P Charlesworth, A Morton, SJ Eglen, NH Komiyama, SGN Grant (2016) Canalization of genetic and pharmacological perturbations in developing primary neuronal activity patterns. Neuropharmacology 100:47–55 Article data.

• JJJ Hjorth, DC Sterratt, CS Cutts, DJ Willshaw, SJ Eglen (2015) Quantitative assessment of computational models for retinotopic map formation. Dev Neurobiol 75:641–666. Article Cover image Code and data

• P Charlesworth, E Cotterill, A Morton, S Grant, SJ Eglen (2015) Quantitative differences in developmental profiles of spontaneous activity in cortical and hippocampal cultures. Neural Dev 10:1. Article Code and data

• CS Cutts, SJ Eglen (2014) Detecting pairwise correlations in spike trains: an objective comparison of methods and application to the study of retinal waves. Journal of Neuroscience 34:14288--14303. Article.

• S Eglen (2014) Open access: sharing your data is easier than you think. Nature 510:340 preprint Article.

• SJ Eglen, M Weeks, M Jessop, J Simonotto, T Jackson, E Sernagor (2014) A data repository and analysis framework for spontaneous neural activity recordings in developing retina. Gigascience 3:3. Article

• A Maccione, MH Hennig, M Gandolfo, O Muthmann, J van Coppenhagen, SJ Eglen, L Berdondini, E Sernagor (2014) Following the Ontogeny of Retinal Waves: Pan-Retinal Recordings of Population Dynamics in the Neonatal Mouse. Journal of Physiology 592:1545-1563. Article

• M Schottdorf, SJ Eglen, F Wolf, W Keil (2014) Can retinal ganglion cell dipoles seed iso-orientation domains in the visual cortex? PLoS One 9:e86139. Article

• J Gjorgjieva, J Berni, JF Evers, SJ Eglen (2013) Neural circuits for peristaltic wave propagation in crawling Drosophila larvae: analysis and modeling. Frontiers in Computational Neuroscience 7:24. Article

• VRA Hore, JB Troy, SJ Eglen (2012) Parasol cell mosaics are unlikely to drive the formation of structured orientation maps in primary visual cortex. Visual Neuroscience 29:283--299 PDF. (Copyright Cambridge University Press; CUP version.)

• F Chabrol, SJ Eglen, E Sernagor (2012) GABAergic control of retinal ganglion cell dendritic development. Neuroscience 227:30--43. Article

• PW Keeley, BJ Sliff, SC Lee, PG Fuerst, RW Burgess, SJ Eglen, BE Reese (2012) Neuronal clustering and fasciculation phenotype in Dscam- and Bax-deficient mouse retinas. Journal of Comparative Neurology 520:1349--1364. Article

• J Gjorgjieva, SJ Eglen (2011) Modeling developmental patterns of spontaneous activity. Current Opinion in Neurobiology 21: 679--684. Preprint Article.

• J Gjorgjieva, T Toyoizumi, SJ Eglen (2009) Burst-time-dependent plasticity robustly guides ON/OFF segregation in the lateral geniculate nucleus. PLoS Computational Biology 5:e1000618. Article.

• KB Godfrey, SJ Eglen, NV Swindale (2009) A multi-component model of the developing retinocollicular pathway incorporating axonal and synaptic growth. PLoS Computational Biology 5:e1000600. Article.

• KB Godfrey, SJ Eglen (2009) Theoretical models of spontaneous activity generation and propagation in the developing retina. Molecular Biosystems 5:1527-1535. Article PDF.

• SJ Eglen (2009). A Quick Guide to Teaching R Programming to Computational Biology Students. PLoS Computational Biology 5:e1000482. Article and supplementary material. LaTeX source for lecture notes also available.

• SJ Eglen, J Gjorgjieva (2009). Self organisation in the developing nervous system: theoretical models. HFSP Journal 3:176-185. Article PDF

• SJ Eglen, DD Lofgreen, MA Raven, BE Reese (2008). Analysis of spatial relationships in three dimensions: tools for the study of nerve cell patterning. BMC Neuroscience 9:68 Article

• SJ Eglen, JCT Wong (2008). Spatial constraints underlying the retinal mosaics of two types of horizontal cells in cat and macaque. Visual Neuroscience 25:209-214. Article PDF

• DM Kronhaus, SJ Eglen (2008) The role of simplifying models in Neuroscience: modelling structure and function. In P. Lio et al. (Eds.) Bioinspired design of networks, Springer Lecture notes in Computer Science 5151:33--44.

• SJ Eglen (2006). Development of regular cellular spacing in the retina: theoretical models. Mathematical Medicine and Biology 23:79-99.PDF

• PJ Diggle, SJ Eglen, JB Troy (2006). Modelling the bivariate spatial distribution of amacrine cells. In A. Baddeley et al. (Eds.) Case Studies in Spatial Point Process Modelling, Springer Lecture notes in Statistics 185:215--233. PDF

• SJ Eglen, PJ Diggle, JB Troy (2005). Homotypic constraints dominate positioning of on- and off-centre beta retinal ganglion cells Visual Neuroscience 22:859--871. PDF

• M Kishi, TT Kummer, SJ Eglen, JR Sanes (2005). LL5 beta: a regulator of postsynaptic differentiation identified in a screen for synaptically enriched transcripts at the neuromuscular junction. Journal of Cell Biology 169:355-366. PDF

• SJ Eglen, J Demas, ROL Wong (2003) Mapping by waves: patterned spontaneous activity regulates retinotopic map refinement. Neuron 40:1053-1055. PDF

• SJ Eglen, MA Raven, E Tamrazian, BE Reese (2003) Dopaminergic amacrine cells in the inner nuclear layer and ganglion cell layer comprise a single functional retinal mosaic J. Comp. Neurol. 466: 343-355. PDF

• E Sernagor, C Young, SJ Eglen (2003) Developmental Modulation of Retinal Wave Dynamics: Shedding Light on the GABA Saga. J Neurosci. 23:7621--7629. PDF

• MA Raven, SJ Eglen, JJ Ohab, BE Reese (2003) Determinants of the exclusion zone in dopaminergic amacrine cell mosaics. J Comp. Neurol. 461:123-136. PDF

• J Demas, SJ Eglen, ROL Wong (2003) Developmental loss of synchronous spontaneous activity in the mouse retina is independent of visual experience. J Neurosci. 23:2851-2860. PDF Supplementary information

• SJ Eglen, DJ Willshaw (2002) Influence of cell fate mechanisms upon retinal mosaic formation: a modelling study. Development 129:5399-5408. PDF

• CW Lee, SJ Eglen, ROL Wong (2002) Segregation of on and off retinogeniculate connectivity directed by patterned spontaneous activity. J Neurophysiol. 88:2311-2321. PDF Supplementary information

• E Sernagor, SJ Eglen, and ROL Wong (2001) Development of retinal ganglion cell structure and function. Progress in Retinal and Eye Research 20:139-174. PDF

• SJ Eglen, A van Ooyen, DJ Willshaw (2000) Lateral cell movement driven by dendritic interactions is sufficient to form retinal mosaics. Network 11:103-118. PDF Supplementary information

• E Sernagnor, SJ Eglen, MJ O'Donovan (2000) Differential effects of acetylcholine and glutamate blockade on the spatiotemporal dynamics of retinal waves. J Neurosci 20:RC56(1-6). PDF Supplementary information

• SJ Eglen (1999) The role of retinal waves and synaptic normalization in retinogeniculate development. Philosophical Transactions of the Royal Society B. 354:497-506. PDF

• C Collin, S Eglen (1998) Book review of An Introduction to Natural Computation by Dana H. Ballard. Trends in Cognitive Sciences 2:235-236.

• S Eglen, A Bray, J Stone (1997) Unsupervised discovery of invariances. Network 8:441-452. PDF. Examples of this network working on adding numbers and multiplying numbers are available.

• AR Tate, D Watson, S Eglen, TN Arvanitis, EL Thomas, JD Bell (1996) Automated Feature-Extraction For The Classification Of Human In-Vivo C¹³ NMR-Spectra Using Statistical Pattern-Recognition And Wavelets. Magnetic Resonance in Medicine 35:834-840.

Other publications

• SJ Eglen (2013) Models of retinotopic development. To appear in Encyclopedia of Computational Neuroscience, Springer, 2014. PDF

• SJ Eglen (2012) Cellular spacing: analysis and modelling of retinal mosaics. In N Le Novère (Ed). Computational Systems Neurobiology, Springer, pages 365-385. PDF.

• SJ Eglen, L Galli-Resta, BE Reese (2003) Theoretical models of retinal mosaic formation. In Modelling Neural Development (ed. A van Ooyen), MIT Press, p133-150.

• J Demas, BT Sagdullaev, SJ Eglen, RG Gregg, MA McCall, ROL Wong (2003) Developmental patterns of spontaneous retinal activity in nob (no b-wave) mice. Program No. 37.2. 2003 Abstract Viewer/Itinerary Planner. Washington, DC: Society for Neuroscience.

• JJ Ohab, MA Raven, SJ Eglen, BE Reese (2002) Distribution and regularity of tyrosine hydroxylase immunoreactive amacrine cells in the mouse retina. Program No. 843.1. 2002 Abstract Viewer/Itinerary Planner. Washington, DC: Society for Neuroscience.

• JA Demas, SJ Eglen, ROL Wong (2002) The role of visual experience in the development of retinal spontaneous activity. Program No. 820.8. 2002 Abstract Viewer/Itinerary Planner. Washington, DC: Society for Neuroscience.

• E Sernagor, SJ Eglen (2001) Developmental changes in retinal waves dynamics. In Society for Neuroscience Abstracts, Vol. 31, p. 1.

• SJ Eglen (2000) An evaluation of competitive and cell death mechanisms in forming on- and off-centre retinal ganglion cell mosaics. CNS 2000 meeting, Brugge.

• SJ Eglen, DJ Willshaw (2000) Estimating the influence of cell fate, mediated by lateral inhibition, upon the development of retinal mosaics. FENS 2000 meeting, Brighton.

• E Sernagnor, SJ Eglen, MJ O'Donovan (1999) Contribution of cholinergic and glutamatergic connections to the spatiotemporal patterns of retinal waves in the chick embryo. In Society for Neuroscience Abstracts Vol. 25, p. 1807.

• SJ Eglen, A van Ooyen (1999) Modelling retinal mosaic development with dendritic outgrowth and lateral cell movement, In the Ninth International Conference on Artificial Neural Networks, September 1999. PDF

• SJ Eglen (1998) Modelling prenatal development of the cat retinogeniculate pathway, Anatomy Society Winter Conference. Abstract published in Journal of Anatomy 192:468-469. Postscript

• SJ Eglen (1997)Modelling the development of the retinogeniculate pathway, D. Phil. thesis, University of Sussex.
  Available in one file as PDF or gzipped Postscript or chapter by chapter: Frontmatter Chapter 1 Chapter 2 Chapter 3 Chapter 4 Chapter 5 Chapter 6 Chapter 7 Backmatter
  

• SJ Eglen, JV Stone, H Barrow (1996) Learning perceptual invariances: a spatial model, CSRP 404, School of Cognitive and Computing Sciences, Sussex University. Postscript

• SJ Eglen (1996) Modelling the prenatal development of the lateral geniculate nucleus. F. L. Silva, J. C. Principe and L. B. Almeida (eds.) Frontiers in Artificial Intelligence and Applications, IOS Press, Amsterdam, 37:33-41. Postscript.

• SJ Eglen (1995) Modelling the Development of the Cat Lateral Geniculate Nucleus with Hebbian Learning. CSRP 383 Cognitive and Computing Sciences, Sussex University. Postscript

• L Bowns, SJ Eglen (1994) Extraction of non-fourier orientation information for texture classification. ARVO Meeting abstract (IOVS 35:1406).

• NP Walker, SJ Eglen, BA Lawrence (1994) Image compression using neural networks. GEC Journal of Research 11:66-75.

• SJ Eglen, AG Hill, FL Lazare, NP Walker (1992) Using Neural Networks. GEC Review 7:146-155.